A high-throughput pipeline for designing microarray-based pathogen diagnostic assays.

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dc.contributor.authorVijaya Satya, Ravi
dc.contributor.authorZavaljevski, Nela
dc.contributor.authorKumar, Kamal
dc.contributor.authorReifman, Jaques
dc.date.accessioned2020-02-10T17:17:26Z
dc.date.available2020-02-10T17:17:26Z
dc.date.issued2008-04-30
dc.description.abstractWe present a methodology for high throughput design of oligonucleotide fingerprints for microarray based pathogen diagnostic assays The oligonucleotide fingerprints or DNA microarray probes are designed for identifying target organisms in environmental or clinical samples The design process is implemented in a high performance computing software pipeline that incorporates major algorithmic improvements over a previous version to both reduce computation time and improve specificity assessment
dc.identifier.urihttp://dx.doi.org/10.1186/1471-2105-9-185
dc.identifier.urihttps://lib.digitalsquare.io/xmlui/handle/123456789/25289
dc.relation.uriBMC bioinformatics
dc.titleA high-throughput pipeline for designing microarray-based pathogen diagnostic assays.en
dcterms.abstractWe present a methodology for high throughput design of oligonucleotide fingerprints for microarray based pathogen diagnostic assays The oligonucleotide fingerprints or DNA microarray probes are designed for identifying target organisms in environmental or clinical samples The design process is implemented in a high performance computing software pipeline that incorporates major algorithmic improvements over a previous version to both reduce computation time and improve specificity assessment
dcterms.contributorVijaya Satya, Ravi
dcterms.contributorZavaljevski, Nela
dcterms.contributorKumar, Kamal
dcterms.contributorReifman, Jaques
dcterms.identifierhttp://dx.doi.org/10.1186/1471-2105-9-185
dcterms.relationBMC bioinformatics
dcterms.titleA high-throughput pipeline for designing microarray-based pathogen diagnostic assays.en
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